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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11698028 chr20:1384215 C/T FKBP1AP1 chr19:58337829-58338146:- -0.5 -6.59 1.47E-10 Box Plot
BLCA rs11703137 chr22:36787930 C/T HNRNPM chr19:8509651-8553998:+ 0.26 6.06 3.28E-9 Box Plot
BLCA rs11704423 chr22:23641261 G/A LOC644165 chr22:25028882-25049326:+ -0.63 -7.72 1.0E-13 Box Plot
BLCA rs11704423 chr22:23641261 G/A POM121L10P chr22:25053448-25054732:- -0.56 -6.73 6.1E-11 Box Plot
BLCA rs117112419 chr12:72151270 T/G SNORA8 chrX:132286782-132286920:+ -0.71 -6.3 8.22E-10 Box Plot
BLCA rs11722552 chr4:13313326 C/T ITGA4 chr2:182321929-182400914:+ 0.48 6.28 9.31E-10 Box Plot
BLCA rs11725539 chr4:85509149 A/G POU2F1 chr1:167190066-167396582:+ 0.37 6.22 1.34E-9 Box Plot
BLCA rs11725539 chr4:85509149 A/G ZMYND17 chr10:75180397-75193319:- -0.35 -7.78 6.67E-14 Box Plot
BLCA rs11726332 chr4:26000066 C/T CTRB1 chr16:75252898-75258822:+ 0.37 7.23 2.62E-12 Box Plot
BLCA rs117278928 chr12:72142254 C/T SNORA8 chrX:132286782-132286920:+ -0.72 -6.45 3.43E-10 Box Plot
BLCA rs11728841 chr4:139096299 A/C TRPV1 chr17:3468738-3512705:- 0.29 6.2 1.43E-9 Box Plot
BLCA rs117293350 chr18:5844835 C/G KRTAP8-1 chr21:32185015-32185570:- 0.48 7.14 4.63E-12 Box Plot
BLCA rs11746266 chr5:123131879 A/G ANXA2P3 chr10:66585329-66586336:+ 0.31 6 4.69E-9 Box Plot
BLCA rs11746266 chr5:123131879 A/G FLJ44635 chrX:71364034-71381599:+ 0.38 7.23 2.71E-12 Box Plot
BLCA rs11746266 chr5:123131879 A/G HSP90B3P chr1:92108073-92109639:+ 0.35 6.17 1.74E-9 Box Plot