Trans-eQTLs across different cancer types
In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
Gene symbol
|
Gene position (hg19)
|
p-valule
|
|||
---|---|---|---|---|---|---|---|---|---|
BLCA | rs11698028 | chr20:1384215 | C/T | FKBP1AP1 | chr19:58337829-58338146:- | -0.5 | -6.59 | 1.47E-10 | Box Plot |
BLCA | rs11703137 | chr22:36787930 | C/T | HNRNPM | chr19:8509651-8553998:+ | 0.26 | 6.06 | 3.28E-9 | Box Plot |
BLCA | rs11704423 | chr22:23641261 | G/A | LOC644165 | chr22:25028882-25049326:+ | -0.63 | -7.72 | 1.0E-13 | Box Plot |
BLCA | rs11704423 | chr22:23641261 | G/A | POM121L10P | chr22:25053448-25054732:- | -0.56 | -6.73 | 6.1E-11 | Box Plot |
BLCA | rs117112419 | chr12:72151270 | T/G | SNORA8 | chrX:132286782-132286920:+ | -0.71 | -6.3 | 8.22E-10 | Box Plot |
BLCA | rs11722552 | chr4:13313326 | C/T | ITGA4 | chr2:182321929-182400914:+ | 0.48 | 6.28 | 9.31E-10 | Box Plot |
BLCA | rs11725539 | chr4:85509149 | A/G | POU2F1 | chr1:167190066-167396582:+ | 0.37 | 6.22 | 1.34E-9 | Box Plot |
BLCA | rs11725539 | chr4:85509149 | A/G | ZMYND17 | chr10:75180397-75193319:- | -0.35 | -7.78 | 6.67E-14 | Box Plot |
BLCA | rs11726332 | chr4:26000066 | C/T | CTRB1 | chr16:75252898-75258822:+ | 0.37 | 7.23 | 2.62E-12 | Box Plot |
BLCA | rs117278928 | chr12:72142254 | C/T | SNORA8 | chrX:132286782-132286920:+ | -0.72 | -6.45 | 3.43E-10 | Box Plot |
BLCA | rs11728841 | chr4:139096299 | A/C | TRPV1 | chr17:3468738-3512705:- | 0.29 | 6.2 | 1.43E-9 | Box Plot |
BLCA | rs117293350 | chr18:5844835 | C/G | KRTAP8-1 | chr21:32185015-32185570:- | 0.48 | 7.14 | 4.63E-12 | Box Plot |
BLCA | rs11746266 | chr5:123131879 | A/G | ANXA2P3 | chr10:66585329-66586336:+ | 0.31 | 6 | 4.69E-9 | Box Plot |
BLCA | rs11746266 | chr5:123131879 | A/G | FLJ44635 | chrX:71364034-71381599:+ | 0.38 | 7.23 | 2.71E-12 | Box Plot |
BLCA | rs11746266 | chr5:123131879 | A/G | HSP90B3P | chr1:92108073-92109639:+ | 0.35 | 6.17 | 1.74E-9 | Box Plot |